Ph: 61 2 6125 2866, Fax: 61 2 6125 5573

.

New Users - Register Now

GenAlEx 6.41 Downloads

GenAlEx 6.41 (for Excel 2003/2007/2010 on PC, pre-Excel 2008 on Mac and Excel 2011 on Intel Mac, includes read me files, zipped 1.6 mb)

GenAlEx Appendix 1 (for Version 6.4 onwards. A 30 page summary of methods and statistics offered in GenAlEx.)

Quick Start to GenAlEx 6.41

GenAlEx Tutorials
Coinciding with the release of GenAlEx 6.3, we are pleased to make available a series of self-paced tutorials on population genetic analysis using GenAlEx. These tutorials are based on material we have prepared to support our national graduate workshop series Genetic Analysis for Populations Studies offered by Rod Peakall (Australian National University) and Peter Smouse (Rutgers University, USA) at the Australian National University every 2 to 3 years since 1996.

Disclaimer
The tutorial modules are provided free for personal use by registered users of the software package GenAlEx. The documents and associated data files must not be used for any other purpose, including teaching in any undergraduate or graduate course, without express permission of the authors. While every effort has been taken to ensure the accuracy of this tutorial documents, supporting data files and the software package GenAlEx, we are unable to take responsibility for unintentional errors or software problems that may be encountered by users. We regret that we are also unable to provide individualized support.

Rod Peakall and Peter Smouse, Dec 2009

GenAlEx Tutorials - An Overview of Topics

Part 1 - An Introduction to Frequency-Based Population Genetic Analysis
Topics include: scoring genetic markers, Allele Frequency, Heterozygosity, F-statistics, Nei Genetic Distance and Shannon Diversity Indices.

GenAlEx Tut1 (includes Tutorial Document and Data Files, zipped, 6 mb)

Part 2 - Genetic Distance and Analysis of Molecular Variance (AMOVA)
Topics include: Haploid, Codominant and Binary Genetic Distance, AMOVA and F-statistics.

GenAlEx Tut2 (includes Tutorial Document and Data Files, zipped, 1.5 mb)

Part 3 - Spatial Genetic Analysis
Topics include: Principal Coordinate Analysis (PCA), Mantel Tests for Matrix Correspondence and Spatial Autocorrelation Analysis.

GenAlEx Tut3 (includes Tutorial Document and Data Files, zipped, 4 mb)

Part 4 - Advanced Frequency-Based Analysis
Topics include: DNA Profile Probability, Probability of Identity, Probability of Exclusion, Population Assignment and Pairwise Relatedness.

GenAlEx Tut4 (includes Tutorial Document and Data Files, zipped, 2.7 mb)

Part 5 - Advanced Features Including Data Import and Export
Topics include: Working with DNA sequences, importing and processing raw genotypic data, and exporting data from GenAlEx to other software packages. The Stats menu and how to customise the GenAlEx menu are also covered briefly.

GenAlEx Tut5 (includes Tutorial Document and Data Files, zipped, 2 mb)

Part 6 - TwoGener
Topics include: Male gametic inference, male gametic distances, gametic AMOVA.

GenAlEx Tut6 (includes Tutorial Document and Data Files, zipped, 1 mb)

Other Documentation

For contact details please refer to the GenAlEx homepage